| Come Together | Cover | 2 |
| Color Me Impressed | Cover | 7 |
| Colon Song | | 1 |
| Cold Turkey | | 2 |
| Cold Shoulder | Still Feel Gone | 1 |
| Cock In My Pocket | Cover | 3 |
| Christ For President | Mermaid Avenue | 134 |
| Childlike and Evergreen | Alpha Mike Foxtrot: Rare Tracks 1994-2014 | 5 |
| Casino Queen | A.M. | 334 |
| Cars Can't Escape | Alpha Mike Foxtrot: Rare Tracks 1994-2014 | 34 |
| Capitol City | The Whole Love | 49 |
| Candyfloss | Summerteeth | 88 |
| Can't Stop Talking | | 2 |
| Can't Stand It | Summerteeth | 151 |
| Camera | More Like The Moon EP | 1 |
| California Stars | Mermaid Avenue | 570 |
| Bull Black Nova | Wilco (the album) | 157 |
| Broken Arrow | Cover | 11 |
| Box Full Of Letters | A.M. | 240 |
| Born Alone | The Whole Love | 143 |
| Bob Dylan's 49th Beard | More Like The Moon EP | 109 |
| Blue Eyed Soul | A.M. | 11 |
| Blood Of The Lamb | Mermaid Avenue, Vol. 2 | 29 |
| Black Moon | The Whole Love | 43 |
| Black Eye | March 16-20, 1992 | 47 |
| Be Not So Fearful | Cover | 46 |
| Baba O'Riley | Cover | 1 |
| Auld Lang Syne | | 1 |
| At My Window Sad And Lonely | Mermaid Avenue | 18 |
| At Least That's What You Said | A Ghost Is Born | 330 |
| Ashes Of American Flags | Yankee Hotel Foxtrot | 247 |
| Art of Almost | The Whole Love | 138 |
| Any Major Dude Will Tell You | Alpha Mike Foxtrot: Rare Tracks 1994-2014 | 1 |
| Another Man's Done Gone | Alpha Mike Foxtrot: Rare Tracks 1994-2014 | 28 |
| Airline To Heaven | Mermaid Avenue, Vol. 2 | 216 |
| Ain't Much To Say | | 1 |
| Acuff-Rose | Anodyne | 97 |
| A Shot In The Arm | Summerteeth | 831 |
| A Magazine Called Sunset | More Like The Moon EP | 52 |
| A Beard Of Stars | Cover | 2 |
| 36 Inches High | Cover | 7 |
| (Was I) In Your Dreams | Being There | 77 |
| (Don't Fear) The Reaper | Cover | 15 |