| It Must Be Love [Labi Siffre] | Cover | 5 | 1.8% | 20 | Feb 28, 2019 | May 29, 2022 | Rare |
| Less Than You Think | A Ghost Is Born | 5 | 1.8% | 12.8 | Jan 6, 2003 | Apr 15, 2024 | Rare |
| Millionaire | | 5 | 1.8% | 3.8 | Dec 17, 2002 | May 16, 2003 | Rare |
| Radio Cure | Yankee Hotel Foxtrot | 5 | 1.8% | 10 | Mar 13, 2013 | Dec 19, 2013 | Rare |
| Ripple [Grateful Dead] | Cover | 5 | 1.8% | 11.6 | Jun 14, 1999 | Feb 15, 2006 | Rare |
| Someone to Lose | Schmilco | 5 | 1.8% | 17.4 | Sep 16, 2017 | Jun 25, 2023 | Rare |
| The Family Gardener | Down With Wilco | 5 | 1.8% | 14.4 | Mar 5, 2005 | Mar 23, 2019 | Rare |
| Western Clear Skies | Twilight Override | 5 | 1.8% | 3.4 | Jun 30, 2024 | Jan 4, 2026 | Rare |
| Wishful Thinking | A Ghost Is Born | 5 | 1.8% | 11.6 | Mar 4, 2005 | Apr 22, 2017 | Rare |
| You Were Wrong | Loose Fur | 5 | 1.8% | 11.6 | Jan 29, 2005 | Jan 24, 2007 | Rare |
| Bad Day Lately | Love Is the King | 4 | 1.5% | 3.8 | Sep 18, 2020 | Jan 19, 2022 | Rare |
| Cruel Country | Cruel Country | 4 | 1.5% | 7 | Dec 2, 2022 | Jun 27, 2023 | Rare |
| Dreaming [Debbie Harry/Chris Stein (Blondie)] | Cover | 4 | 1.5% | 10.8 | Jun 14, 1999 | Jan 29, 2005 | Rare |
| Hearts Hard to Find | Cruel Country | 4 | 1.5% | 9.3 | Jan 6, 2023 | Apr 11, 2024 | Rare |
| Hints | Cruel Country | 4 | 1.5% | 9.8 | Jul 17, 2021 | Jun 25, 2023 | Rare |
| Hotel Arizona | Being There | 4 | 1.5% | 17.3 | Jan 11, 1997 | Apr 8, 2006 | Rare |
| How Hard It Is for a Desert to Die | Warm | 4 | 1.5% | 12 | Jan 7, 2019 | Jun 30, 2024 | Rare |
| I Might | The Whole Love | 4 | 1.5% | 9 | Jul 10, 2011 | Jan 5, 2015 | Rare |
| I'm Into Something Good [Carole King and Gerry Goffin] | Cover | 4 | 1.5% | 13.8 | Mar 26, 1998 | Mar 22, 2019 | Rare |
| If That's Alright | Still Feel Gone | 4 | 1.5% | 13.3 | Apr 8, 2006 | Feb 14, 2014 | Rare |
| More Like The Moon | More Like The Moon EP | 4 | 1.5% | 11.5 | May 16, 2003 | Apr 18, 2025 | Rare |
| Open Mind | The Whole Love | 4 | 1.5% | 11.3 | Jul 8, 2011 | Dec 18, 2013 | Rare |
| Secret Of The Sea | Mermaid Avenue, Vol. 2 | 4 | 1.5% | 16.5 | Mar 4, 2005 | May 14, 2016 | Rare |
| Sign of Life | Twilight Override | 4 | 1.5% | 4.3 | Oct 30, 2025 | Nov 11, 2025 | Rare |
| Sunlight Ends | Cousin | 4 | 1.5% | 6.5 | May 31, 2024 | Apr 18, 2025 | Rare |
| Too Far Apart | A.M. | 4 | 1.5% | 10.8 | Jan 11, 1997 | May 13, 2016 | Rare |
| Where Do I Begin | Star Wars | 4 | 1.5% | 10 | Apr 29, 2016 | Apr 22, 2017 | Rare |
| Yesterday [Paul McCartney] | Cover | 4 | 1.5% | 19.5 | Nov 23, 1997 | Nov 15, 1998 | Rare |
| You Are My Face | Sky Blue Sky | 4 | 1.5% | 9.5 | Apr 6, 2007 | May 31, 2024 | Rare |
| A Bowl and a Pudding | Cousin | 3 | 1.1% | 13.7 | Apr 11, 2024 | Oct 29, 2024 | Rare |
| Ain't No Doubt About It | | 3 | 1.1% | 12.3 | Sep 16, 2017 | Mar 1, 2022 | Rare |
| Another Man's Done Gone [Woody Guthrie] | Alpha Mike Foxtrot: Rare Tracks 1994-2014 | 3 | 1.1% | 14.7 | Nov 15, 1998 | Sep 16, 2017 | Rare |
| Blood Of The Lamb | Mermaid Avenue, Vol. 2 | 3 | 1.1% | 16.3 | Oct 19, 1999 | Sep 13, 2000 | Rare |
| Can't Stand It | Summerteeth | 3 | 1.1% | 10.3 | Jun 14, 1999 | Feb 20, 2006 | Rare |
| Hell Is Chrome | A Ghost Is Born | 3 | 1.1% | 18.3 | Jan 28, 2006 | Mar 31, 2012 | Rare |
| I Must Be High | A.M. | 3 | 1.1% | 20 | Mar 26, 1998 | Jan 26, 2008 | Rare |
| I Wanna Be Your Dog | | 3 | 1.1% | 13 | Jan 30, 2009 | Mar 26, 2009 | Rare |
| I Wanna Be Your Mama Again [Doug Sahm] | Cover | 3 | 1.1% | 22.3 | Jan 20, 2020 | Jun 4, 2021 | Rare |
| I'm Only Sleeping [Lennon/McCartney] | Cover | 3 | 1.1% | 21.7 | Jan 11, 1997 | Jan 29, 2005 | Rare |
| If I Ever Was a Child | Schmilco | 3 | 1.1% | 11.3 | May 13, 2016 | Apr 15, 2024 | Rare |
| In Christ, There Is No East Or West | | 3 | 1.1% | 13.3 | Aug 16, 2006 | Oct 27, 2006 | Rare |
| Little Lies [Fleetwood Mac] | Cover | 3 | 1.1% | 9 | Dec 2, 2022 | Jan 6, 2023 | Rare |
| Love Is for Love | Twilight Override | 3 | 1.1% | 8 | Oct 13, 2024 | Jan 8, 2026 | Rare |
| Magnetized | Star Wars | 3 | 1.1% | 15.7 | May 14, 2016 | Jun 1, 2024 | Rare |
| Many Worlds | Cruel Country | 3 | 1.1% | 6 | Jan 5, 2023 | Apr 12, 2024 | Rare |
| Message From Mid-Bar | | 3 | 1.1% | 5 | Mar 30, 2012 | Jun 1, 2024 | Rare |
| My Words | | 3 | 1.1% | 9 | May 16, 2003 | Nov 17, 2005 | Rare |
| One True Vine | Sky Blue Sky Tour EP | 3 | 1.1% | 13.3 | Dec 6, 2013 | Jan 5, 2023 | Rare |
| Outta Mind (Outta Sight) | Being There | 3 | 1.1% | 24 | Jan 29, 2005 | Dec 28, 2017 | Rare |
| Panthers (Proving Death Again) | Alpha Mike Foxtrot: Rare Tracks 1994-2014 | 3 | 1.1% | 7.3 | May 16, 2003 | May 15, 2015 | Rare |
| Please Be Wrong | Cruel Country | 3 | 1.1% | 10 | Jul 17, 2021 | Jan 6, 2023 | Rare |
| Poor Places | Yankee Hotel Foxtrot | 3 | 1.1% | 14.7 | Jun 12, 2002 | Mar 22, 2019 | Rare |
| Random Name Generator | Star Wars | 3 | 1.1% | 20.7 | Apr 22, 2017 | Mar 23, 2019 | Rare |
| Reflections On A Crystal Wind [Richard & Mimi Farina] | Cover | 3 | 1.1% | 16.7 | Nov 24, 1997 | Sep 12, 2000 | Rare |
| Say I Love You Again | | 3 | 1.1% | 6.7 | Sep 30, 2021 | Jan 6, 2023 | Rare |
| Shouldn't Be Ashamed | A.M. | 3 | 1.1% | 19.3 | Mar 26, 1998 | Jan 28, 2006 | Rare |
| Sick Server | Warmer | 3 | 1.1% | 7 | Mar 12, 2019 | Apr 10, 2019 | Rare |
| Ten Sentences | Warmer | 3 | 1.1% | 14.7 | Jun 30, 2019 | Jul 17, 2021 | Rare |
| Wait for Love | Sukierae | 3 | 1.1% | 16 | May 15, 2015 | Feb 25, 2022 | Rare |
| What's The World Got In Store | Being There | 3 | 1.1% | 10.3 | Oct 19, 1999 | Jan 28, 2006 | Rare |
| ...And Then You Cut It in Half | Warmer | 2 | 0.7% | 11.5 | Jun 30, 2019 | Jan 20, 2020 | Rare |
| A Fool Such As I [Trader (Elvis Presley)] | Cover | 2 | 0.7% | 25 | Mar 26, 1998 | Oct 19, 1999 | Rare |
| Bright Phoebus [Lal and Mike Waterson] | Cover | 2 | 0.7% | 17 | Jan 6, 2019 | Jan 7, 2019 | Rare |
| Cinnamon Girl [Neil Young] | Cover | 2 | 0.7% | 24.5 | Feb 1, 2018 | Apr 3, 2019 | Rare |
| Cosmic Dancer [T. Rex] | Cover | 2 | 0.7% | 23.5 | Dec 4, 2023 | Jun 30, 2024 | Rare |
| Don't Let Me Down [Beatles] | Cover | 2 | 0.7% | 25 | Jun 4, 2021 | Sep 30, 2021 | Rare |
| Don't You Honey Me | Alpha Mike Foxtrot: Rare Tracks 1994-2014 | 2 | 0.7% | 9 | Nov 23, 1997 | May 15, 2015 | Rare |
| fragment of Elizabeth Cotten song | | 2 | 0.7% | 10.5 | Aug 16, 2006 | Aug 18, 2006 | Rare |
| From Far Away | Warm | 2 | 0.7% | 12 | Jan 7, 2019 | Mar 22, 2019 | Rare |
| God [John Lennon] | Cover | 2 | 0.7% | 23.5 | Dec 8, 2013 | Dec 12, 2013 | Rare |
| Having a Hard Time | | 2 | 0.7% | 16.5 | Jan 5, 2023 | Jan 6, 2023 | Rare |
| I'm Beginning To See The Light [Don George, Johnny Hodges, Duke Ellington and Harry James] | Cover | 2 | 0.7% | 8 | Feb 6, 2006 | Apr 8, 2006 | Rare |
| I'm Kind of in Love with You | | 2 | 0.7% | 9.5 | Jul 19, 2023 | May 31, 2024 | Rare |
| Immigrant Song [Led Zeppelin] | Cover | 2 | 0.7% | 20 | May 4, 2001 | Jan 30, 2007 | Rare |
| Ingrid Bergman | Mermaid Avenue | 2 | 0.7% | 11.5 | Mar 26, 1998 | Nov 15, 1998 | Rare |
| Just a Friend [Biz Markie] | Cover | 2 | 0.7% | 14 | Jul 17, 2021 | Jul 19, 2021 | Rare |
| Just Say Goodbye | Schmilco | 2 | 0.7% | 17.5 | Aug 6, 2016 | May 31, 2024 | Rare |
| Kicking Television | A Ghost Is Born | 2 | 0.7% | 20.5 | May 16, 2003 | Apr 18, 2025 | Rare |
| Love & Mercy [Brian Wilson] | Cover | 2 | 0.7% | 13 | Apr 6, 2007 | Feb 13, 2009 | Rare |
| Marquee Moon [Television] | Cover | 2 | 0.7% | 16 | Mar 15, 2019 | Apr 16, 2019 | Rare |
| Mine Forever | | 2 | 0.7% | 6 | Oct 11, 2024 | Oct 19, 2024 | Rare |
| Nobody Dies Anymore | Sukierae | 2 | 0.7% | 13.5 | May 15, 2015 | May 13, 2016 | Rare |
| Now and Then | | 2 | 0.7% | 3.5 | Oct 11, 2024 | Oct 29, 2024 | Rare |
| Old Maid | Alpha Mike Foxtrot: Rare Tracks 1994-2014 | 2 | 0.7% | 9 | Jan 6, 2003 | Jan 9, 2003 | Rare |
| Only The Lord Knows [Mavis Staples] | Cover | 2 | 0.7% | 16 | May 14, 2016 | Jun 16, 2017 | Rare |
| Out for a Walk | | 2 | 0.7% | 5.5 | Mar 1, 2022 | Apr 15, 2024 | Rare |
| Pittsburgh | Cousin | 2 | 0.7% | 3.5 | Apr 12, 2024 | May 31, 2024 | Rare |
| Sad Kind of Way | Cruel Country | 2 | 0.7% | 11 | Jun 25, 2023 | Jun 28, 2023 | Rare |
| Side With The Seeds | Sky Blue Sky | 2 | 0.7% | 10.5 | Jun 25, 2023 | Jan 4, 2026 | Rare |
| The Good Part | Alpha Mike Foxtrot: Rare Tracks 1994-2014 | 2 | 0.7% | 29.5 | Jan 29, 2005 | Apr 6, 2007 | Rare |
| This Ain't No Lounge Ax | | 2 | 0.7% | 1 | Sep 12, 2000 | Sep 13, 2000 | Rare |
| Too Real | Twilight Override | 2 | 0.7% | 13.5 | Oct 29, 2025 | Jan 8, 2026 | Rare |
| Venus Stopped the Train | | 2 | 0.7% | 5 | Jan 6, 2023 | Oct 18, 2024 | Rare |
| Walk On [Neil Young] | Cover | 2 | 0.7% | 22.5 | Feb 25, 2006 | Apr 8, 2006 | Rare |
| Walk Where He Walked | Down By The Old Mainstream | 2 | 0.7% | 28.5 | Jan 29, 2005 | Apr 8, 2006 | Rare |
| We Aren't the World (Safety Girl) | Schmilco | 2 | 0.7% | 11.5 | Aug 7, 2016 | Apr 22, 2017 | Rare |
| You're Not Gonna Win | | 2 | 0.7% | 14 | Apr 12, 2024 | Jun 30, 2024 | Rare |
| A Beard Of Stars [T. Rex] | Cover | 1 | 0.4% | 7 | May 14, 2000 | May 14, 2000 | Once |
| All The Young Dudes [David Bowie/Mott The Hoople] | Cover | 1 | 0.4% | 42 | Jan 29, 2005 | Jan 29, 2005 | Once |
| Anarchy In The UK [Sex Pistols] | Cover | 1 | 0.4% | 25 | Jan 29, 2005 | Jan 29, 2005 | Once |