| U.S. Blues [Grateful Dead] | Cover | 27 | 1.6% | 25.3 | Sep 10, 2022 | Aug 30, 2025 | Rare |
| Let's Not Get Carried Away | Sky Blue Sky Tour EP | 26 | 1.6% | 22.3 | Oct 4, 2006 | Jan 17, 2026 | Rare |
| Immigrant Song [Led Zeppelin] | Cover | 25 | 1.6% | 23.9 | Mar 29, 1997 | Sep 27, 2002 | Rare |
| All Across the World | Cruel Country | 24 | 1.5% | 10.3 | May 27, 2022 | Mar 25, 2023 | Rare |
| The Universe | Cruel Country | 24 | 1.5% | 12.7 | May 27, 2022 | May 8, 2026 | Rare |
| What's The World Got In Store | Being There | 24 | 1.5% | 9.5 | Jul 2, 1996 | Jun 23, 2017 | Rare |
| Hearts Hard to Find | Cruel Country | 22 | 1.4% | 11.9 | May 27, 2022 | Dec 6, 2024 | Rare |
| Interview | | 22 | 0.5% | 5.2 | May 12, 1995 | Nov 17, 2004 | Rare |
| No Sense In Lovin' | Anodyne | 22 | 1.4% | 8.8 | Nov 17, 1994 | Jul 27, 1995 | Rare |
| Walk Where He Walked | Down By The Old Mainstream | 22 | 1.4% | 7 | Nov 17, 1994 | Oct 27, 1995 | Rare |
| James Alley Blues [Richard "Rabbit" Brown] | Alpha Mike Foxtrot: Rare Tracks 1994-2014 | 21 | 1.3% | 10.9 | Oct 30, 1997 | Jun 21, 2013 | Rare |
| Pecan Pie | Down By The Old Mainstream | 21 | 1.3% | 17.3 | Nov 21, 1994 | Jul 7, 1999 | Rare |
| Pieholden Suite | Summerteeth | 21 | 1.3% | 11.3 | Dec 3, 2001 | Apr 24, 2022 | Rare |
| Political Science [Randy Newman] | Cover | 21 | 1.3% | 19.5 | Dec 30, 2004 | Oct 19, 2006 | Rare |
| Reincarnation [Roger Miller] | Cover | 21 | 1.2% | 19 | Nov 17, 1994 | Oct 9, 2022 | Rare |
| Rising Red Lung | The Whole Love | 21 | 1.3% | 9.5 | Sep 17, 2011 | Sep 19, 2012 | Rare |
| The Thanks I Get | Sky Blue Sky Tour EP | 21 | 1.3% | 22.2 | Mar 5, 2006 | Jan 21, 2020 | Rare |
| Listen To Her Heart [Tom Petty] | Cover | 20 | 1.2% | 23.4 | Nov 17, 1994 | Oct 20, 1995 | Rare |
| The Good Part | Alpha Mike Foxtrot: Rare Tracks 1994-2014 | 20 | 1.2% | 14.4 | Mar 5, 2006 | Jun 28, 2024 | Rare |
| Black Eye | March 16-20, 1992 | 19 | 1.2% | 16.7 | Nov 21, 1994 | Oct 11, 1995 | Rare |
| Don't You Honey Me | Alpha Mike Foxtrot: Rare Tracks 1994-2014 | 19 | 1.2% | 11.9 | Mar 18, 1995 | Nov 17, 1995 | Rare |
| Happy Birthday | | 19 | 1.2% | 15.9 | Nov 5, 1999 | Aug 3, 2013 | Rare |
| Something In The Air [Thunderclap Newman] | Cover | 19 | 1.2% | 24.9 | Dec 31, 2004 | Oct 14, 2005 | Rare |
| Who Were You Thinking Of [Texas Tornados] | Alpha Mike Foxtrot: Rare Tracks 1994-2014 | 19 | 1.2% | 19.2 | Dec 16, 1994 | May 23, 1997 | Rare |
| I Shall Be Released [Bob Dylan] | Alpha Mike Foxtrot: Rare Tracks 1994-2014 | 18 | 1.1% | 22 | Dec 31, 2004 | Oct 26, 2008 | Rare |
| If That's Alright | Still Feel Gone | 18 | 1.1% | 12.1 | Nov 17, 1994 | Oct 25, 1995 | Rare |
| Let's Hear It For Rock and Roll | | 18 | 1.1% | 21.8 | Nov 17, 1994 | Oct 28, 1995 | Rare |
| Will You Still Love Me Tomorrow [Carole King] | Cover | 18 | 1.1% | 19.1 | Nov 1, 1996 | Feb 28, 1997 | Rare |
| Just A Kid | The SpongeBob SquarePants Movie | 17 | 1.1% | 24.3 | May 6, 2005 | Jan 17, 2026 | Rare |
| Thank You Friends [Big Star] | Cover | 17 | 1.1% | 32.7 | Mar 22, 2010 | Jun 21, 2013 | Rare |
| (Don't Fear) The Reaper [Blue Öyster Cult] | Cover | 16 | 1.0% | 23.4 | Oct 31, 2004 | Jun 21, 2013 | Rare |
| Watch Me Fall | Still Feel Gone | 14 | 0.9% | 15.8 | Apr 29, 1995 | Nov 11, 1995 | Rare |
| Levee | Cousin | 13 | 0.8% | 7.2 | Oct 6, 2023 | Dec 13, 2024 | Rare |
| Country Song Upside-Down | Cruel Country | 12 | 0.7% | 12.8 | May 27, 2022 | May 8, 2026 | Rare |
| Henry & The H Bombs [Mott The Hoople] | Cover | 12 | 0.7% | 24.4 | May 15, 1995 | Dec 31, 1998 | Rare |
| In The Street [Big Star] | Cover | 12 | 0.7% | 25.8 | Oct 10, 2009 | Jul 7, 2026 | Rare |
| Screen Door | No Depression | 12 | 0.7% | 17.8 | Apr 28, 1995 | May 10, 1997 | Rare |
| True Love Will Find You In the End [Daniel Johnston] | Alpha Mike Foxtrot: Rare Tracks 1994-2014 | 12 | 0.7% | 10.5 | Aug 18, 1997 | Aug 10, 2015 | Rare |
| An Empty Corner | Ode to Joy | 11 | 0.7% | 20.5 | Jun 29, 2019 | Jan 21, 2020 | Rare |
| Blue Eyed Soul | A.M. | 11 | 0.7% | 13.6 | Nov 23, 1994 | Dec 14, 2024 | Rare |
| Broken Arrow [Buffalo Springfield] | Cover | 11 | 0.7% | 21.5 | Feb 7, 2010 | May 6, 2010 | Rare |
| Mystery Binds | Cruel Country | 11 | 0.7% | 12.9 | May 27, 2022 | Aug 27, 2023 | Rare |
| Open Mind | The Whole Love | 11 | 0.7% | 11.3 | Oct 2, 2011 | Oct 11, 2013 | Rare |
| Satan, Your Kingdom Must Come Down | March 16-20, 1992 | 11 | 0.7% | 17.8 | May 16, 1995 | Dec 31, 1997 | Rare |
| Cinnamon Girl [Neil Young] | Cover | 10 | 0.6% | 17 | Jun 21, 2013 | Nov 23, 2019 | Rare |
| Comment (If All Men Are Truly Brothers) [Charles Wright and the Watts 103rd St. Rhythm Band] | Cover | 10 | 0.6% | 23.8 | Dec 30, 2004 | May 7, 2005 | Rare |
| Cruel To Be Kind [Nick Lowe] | Cover | 10 | 0.6% | 25.1 | Oct 29, 2011 | Dec 12, 2011 | Rare |
| Dark Neon | Alpha Mike Foxtrot: Rare Tracks 1994-2014 | 10 | 0.6% | 17.7 | Dec 6, 2014 | Jan 18, 2026 | Rare |
| Nope | Schmilco | 10 | 0.6% | 13.5 | Aug 17, 2016 | Sep 15, 2016 | Rare |
| Soldier Child | Cousin | 10 | 0.6% | 7.4 | Sep 29, 2023 | Dec 5, 2023 | Rare |
| Wherever | | 10 | 0.6% | 22.5 | Nov 21, 1994 | Jul 5, 1995 | Rare |
| Ziggy Stardust [David Bowie] | Cover | 8 | 0.5% | 21 | Mar 29, 1997 | Aug 15, 1999 | Rare |
| 36 Inches High [Jim Ford] | Cover | 7 | 0.4% | 19.1 | Sep 25, 2011 | Oct 5, 2011 | Rare |
| Color Me Impressed [The Replacements] | Cover | 7 | 0.4% | 22.4 | Feb 27, 1997 | Jun 21, 2013 | Rare |
| I Can't Keep From Talking | Weird Tales | 7 | 0.4% | 16.6 | May 23, 1995 | Oct 26, 1995 | Rare |
| I Love My Label [Nick Lowe] | Alpha Mike Foxtrot: Rare Tracks 1994-2014 | 7 | 0.4% | 17.4 | Jun 25, 2011 | Oct 5, 2011 | Rare |
| Someday Some Morning Sometime | Mermaid Avenue, Vol. 2 | 7 | 0.4% | 17 | Mar 29, 2010 | Dec 8, 2014 | Rare |
| Space Oddity [David Bowie] | Cover | 7 | 0.4% | 25.9 | Feb 5, 2016 | Feb 14, 2016 | Rare |
| Sunlight Ends | Cousin | 7 | 0.4% | 10.4 | Oct 5, 2023 | Dec 8, 2023 | Rare |
| More Like The Moon | More Like The Moon EP | 6 | 0.4% | 14.3 | Apr 28, 2003 | Jun 28, 2024 | Rare |
| She's My Rock [Sharon K Dobbins] | Cover | 6 | 0.2% | 20.7 | May 27, 2022 | Sep 27, 2023 | Rare |
| Sugar Baby [Dock Boggs] | Cover | 6 | 0.4% | 4.3 | Oct 30, 1997 | Aug 28, 1999 | Rare |
| Tomorrow Never Knows [The Beatles] | Cover | 6 | 0.4% | 18.7 | Jul 14, 2013 | Jan 15, 2026 | Rare |
| Unknown??? | | 6 | 0.1% | 16.7 | Apr 30, 1999 | Jul 31, 2000 | Rare |
| Ambulance | Cruel Country | 5 | 0.3% | 8.2 | May 27, 2022 | Apr 30, 2023 | Rare |
| Childlike and Evergreen | Alpha Mike Foxtrot: Rare Tracks 1994-2014 | 5 | 0.3% | 12 | Oct 7, 1995 | Dec 5, 2014 | Rare |
| Dueling Banjos | | 5 | 0.3% | 22.4 | Apr 30, 1997 | Feb 17, 1999 | Rare |
| Happiness | Schmilco | 5 | 0.3% | 12.6 | Sep 6, 2016 | Nov 14, 2016 | Rare |
| I Wish I Was Your Mother [Ian Hunter (Mott the Hoople)] | Cover | 5 | 0.3% | 16.6 | Oct 22, 1996 | Jul 26, 2013 | Rare |
| Intro | | 5 | 0.3% | 1 | Jun 4, 1995 | May 26, 2002 | Rare |
| Losing Traction | | 5 | 0.3% | 17.6 | Jun 27, 2026 | Jul 11, 2026 | Rare |
| Sloth [Fairport Convention] | Cover | 5 | 0.3% | 8.2 | Jul 5, 2013 | Jul 15, 2013 | Rare |
| The Waiting [Tom Petty & The Heartbreakers] | Cover | 5 | 0.3% | 26 | Oct 3, 2017 | Oct 9, 2017 | Rare |
| Won't Get Fooled Again [The Who] | Cover | 5 | 0.3% | 23.2 | Nov 5, 1999 | Nov 19, 2000 | Rare |
| Dead Flowers [The Rolling Stones] | Cover | 4 | 0.2% | 11.3 | Sep 4, 1995 | Oct 11, 2013 | Rare |
| Ever Fallen In Love [The Buzzcocks] | Cover | 4 | 0.2% | 22.3 | Oct 30, 1997 | Nov 6, 1997 | Rare |
| I Wanna Be Sedated [The Ramones] | Cover | 4 | 0.2% | 21.8 | May 9, 1997 | Jun 14, 1997 | Rare |
| Please Be Wrong | Cruel Country | 4 | 0.2% | 9.5 | May 27, 2022 | Apr 30, 2023 | Rare |
| Promising | Chelsea Walls | 4 | 0.2% | 16.3 | May 26, 1995 | Oct 28, 2014 | Rare |
| Ripple [Grateful Dead] | Cover | 4 | 0.2% | 14.5 | Jun 21, 2013 | Oct 30, 2014 | Rare |
| The Weight [The Band] | Cover | 4 | 0.2% | 24.3 | Dec 12, 2011 | Jan 20, 2022 | Rare |
| Tonight I'll Be Staying Here With You [Bob Dylan] | Cover | 4 | 0.1% | 12.8 | Oct 9, 2022 | Sep 27, 2023 | Rare |
| Turn Around and Come Back To Me | | 4 | 0.2% | 11.5 | Jul 20, 1995 | Sep 10, 1995 | Rare |
| Cock In My Pocket [Iggy Pop (The Stooges)] | Cover | 3 | 0.2% | 18.3 | Nov 6, 1996 | Dec 2, 1996 | Rare |
| Dash 7 | A.M. | 3 | 0.2% | 13.7 | Feb 16, 2008 | Dec 9, 2014 | Rare |
| Death of the Last Stripper [Terry Allen] | Cover | 3 | 0.1% | 19.7 | Sep 15, 2022 | Oct 9, 2022 | Rare |
| Hesitation | | 3 | 0.2% | 16 | Jun 14, 1995 | Aug 2, 2025 | Rare |
| Message From Mid-Bar | | 3 | 0.2% | 6.3 | Dec 9, 2014 | Jun 28, 2024 | Rare |
| new song (Let's Fight) | | 3 | 0.2% | 10.7 | Jul 13, 2006 | Aug 6, 2006 | Rare |
| Sad Kind of Way | Cruel Country | 3 | 0.2% | 13.7 | May 27, 2022 | Dec 15, 2024 | Rare |
| Solitaire | Wilco (the album) | 3 | 0.2% | 2 | Jul 28, 2013 | Oct 21, 2014 | Rare |
| The Auld Triangle [Brendan Behan] | Cover | 3 | 0.2% | 19 | Nov 3, 1997 | Nov 6, 1997 | Rare |
| Venus Stopped the Train | | 3 | 0.2% | 14.3 | Jun 28, 2024 | Dec 13, 2024 | Rare |
| (What's So Funny 'Bout) Peace, Love and Understanding [Nick Lowe] | Cover | 2 | 0.1% | 13.5 | Jun 21, 2013 | Jul 18, 2013 | Rare |
| Alone | | 2 | 0.1% | 14.5 | Dec 9, 2014 | Jan 15, 2026 | Rare |
| Can't Stop Talking | | 2 | 0.1% | 16 | Apr 29, 1995 | Oct 27, 1995 | Rare |
| Cold Turkey | | 2 | 0.1% | 18.5 | Dec 14, 1996 | Mar 31, 1997 | Rare |
| Come Together [The Beatles] | Cover | 2 | 0.1% | 14.5 | Jul 7, 1999 | Aug 15, 1999 | Rare |
| Cut Your Hair [Pavement] | Cover | 2 | 0.1% | 11.5 | Jun 21, 2013 | Jan 20, 2022 | Rare |
| Everlasting Everything | Wilco (the album) | 2 | 0.1% | 19.5 | Jul 3, 2009 | Dec 11, 2014 | Rare |